C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001417 Rhbg 10090 - 3:88242874-88287210 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000163277 Rhbg-003 88245195-88287210 processed_transcript
  ENSMUST00000165196 Rhbg-002 88243380-88287210 protein_coding
  ENSMUST00000171887 Rhbg-001 88242874-88254709 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000163277ENSMUST00000165196ENSMUST00000171887
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000163277 N/A 0.345±0.13 N/A 0.028±0.00 0.677±0.00 N/A N/A N/A N/A 1.179±0.00 0.537±0.11 N/A 0.664±0.00
ENSMUST00000165196 0.662±0.00 0.516±0.12 N/A N/A 1.020±0.00 0.589±0.00 N/A N/A 2.124±1.50 2.920±0.00 0.925±0.55 0.253±0.00 1.117±0.00
ENSMUST00000171887 0.770±0.26 0.525±0.25 1.919±0.66 0.289±0.00 0.973±0.43 2.901±1.01 0.121±0.00 26.373±15.59 11.044±7.56 5.510±1.18 0.815±0.16 0.173±0.08 0.700±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0002 VISTA 3:87682625-88286876
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 ISS integral component of plasma membrane
GO:0008519 IEA ammonium transmembrane transporter activity
GO:0014731 ISS spectrin-associated cytoskeleton
GO:0015696 IDA ammonium transport
GO:0016020 IDA membrane
GO:0016323 IDA basolateral plasma membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0072488 IEA ammonium transmembrane transport

Homologs

No Homologs available.

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