C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog gene family, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002233 Rhoc 10090 + 3:104789011-104794459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002303 Rhoc-001 104789011-104794459 protein_coding
  ENSMUST00000106787 Rhoc-002 104789034-104794344 protein_coding
  ENSMUST00000132721 Rhoc-003 104791983-104792880 processed_transcript
  ENSMUST00000176347 Rhoc-004 104789058-104794051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002303ENSMUST00000106787ENSMUST00000176347
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002303 68.412±10.00 18.388±3.28 67.061±1.59 10.449±5.93 36.545±12.28 103.841±11.41 34.866±5.45 34.737±3.90 9.917±4.90 52.659±1.31 16.991±1.25 50.169±12.97 85.336±17.66 2.143±1.12
ENSMUST00000106787 15.936±3.88 22.104±3.74 N/A 2.834±0.00 21.920±6.55 41.413±17.71 6.341±0.51 5.337±0.56 0.883±0.19 13.443±2.14 3.086±0.00 21.198±7.66 44.173±10.75 0.432±0.00
ENSMUST00000176347 N/A N/A N/A 14.268±0.00 5.994±0.00 N/A N/A N/A 4.607±0.16 N/A N/A 136.042±0.00 280.812±20.22 1.814±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000878 CIL_000878_0002 VISTA 3:104296935-104900599
CIL_0009BY CIL_0009BY_0002 VISTA 3:104296978-104900566

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 ISS cytokinesis
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0032154 ISS cleavage furrow
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043297 IDA apical junction assembly
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018328 rhoad ras homolog gene family, member Ad protein_coding Danio_rerio
ENSDARG00000021309 rhoae ras homolog gene family, member Ae protein_coding Danio_rerio
ENSG00000155366 RHOC ras homolog family member C protein_coding Homo_sapiens

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