C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002416 Ndufb2 10090 + 6:39592574-39603382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002490 Ndufb2-004 39592585-39599422 processed_transcript
  ENSMUST00000119379 Ndufb2-002 39592583-39599471 protein_coding
  ENSMUST00000128064 Ndufb2-003 39597264-39599292 retained_intron
  ENSMUST00000135239 Ndufb2-006 39601781-39603310 processed_transcript
  ENSMUST00000135671 Ndufb2-001 39592574-39603382 protein_coding
  ENSMUST00000146793 Ndufb2-005 39592588-39596747 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002490ENSMUST00000119379ENSMUST00000135671ENSMUST00000146793
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002490 N/A N/A N/A 286.829±0.00 120.162±0.00 N/A 86.207±0.00 N/A N/A N/A 112.681±21.13 286.519±0.00 344.845±209.56 N/A
ENSMUST00000119379 136.679±34.48 391.384±122.92 198.738±0.00 227.101±112.78 142.781±87.67 81.188±5.70 389.834±28.32 207.503±40.75 174.825±59.96 59.548±13.79 199.908±19.81 127.220±87.99 311.929±289.21 83.390±29.32
ENSMUST00000135671 N/A N/A N/A 5.195±0.79 N/A N/A N/A N/A 3.161±0.35 N/A 2.127±0.33 N/A 3.395±0.00 N/A
ENSMUST00000146793 63.144±3.70 283.995±118.93 N/A N/A 211.555±78.71 113.981±36.79 203.072±4.15 123.408±32.45 N/A 62.028±6.77 N/A 101.931±27.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000306 CIL_000306_0002 CGP 6:39462378-39596595
CIL_00039Z CIL_00039Z_0002 CGP 6:39573873-39603382
CIL_00039Y CIL_00039Y_0002 CGP 6:39592574-39725463

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005747 IEA mitochondrial respiratory chain complex I
GO:0008150 ND biological_process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045490 NDUFB2 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa protein_coding Danio_rerio
ENSG00000090266 NDUFB2 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa protein_coding Homo_sapiens

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