C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline dehydrogenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003526 Prodh 10090 - 16:18060357-18090203 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003620 Prodh-002 18071726-18089292 protein_coding
  ENSMUST00000123969 Prodh-005 18081012-18082319 processed_transcript
  ENSMUST00000126087 Prodh-006 18072256-18079942 protein_coding
  ENSMUST00000132241 Prodh-003 18084204-18089022 protein_coding
  ENSMUST00000136776 Prodh-001 18071726-18090203 protein_coding
  ENSMUST00000139861 Prodh-004 18060357-18089163 protein_coding
  ENSMUST00000141635 Prodh-007 18072126-18079268 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003620ENSMUST00000126087ENSMUST00000132241ENSMUST00000136776ENSMUST00000141635
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003620 8.971±2.56 13.107±4.81 8.536±0.34 3.644±0.00 9.210±4.32 4.702±0.86 8.922±0.55 69.410±12.85 30.478±28.85 9.455±0.63 3.670±0.93 6.826±4.27 3.127±1.78 0.587±0.06
ENSMUST00000126087 N/A N/A N/A N/A 7.946±0.00 N/A N/A N/A N/A N/A N/A 8.652±0.00 N/A 1.169±0.00
ENSMUST00000132241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.047±0.00 N/A 1.600±0.00
ENSMUST00000136776 6.951±1.13 N/A 7.269±1.61 14.404±0.00 3.513±0.72 3.272±1.33 4.252±1.62 68.527±10.03 35.737±40.17 6.456±2.34 2.038±0.70 6.880±2.50 6.363±4.77 0.826±0.48
ENSMUST00000141635 N/A N/A N/A N/A 6.299±0.00 5.524±0.90 6.474±0.00 57.152±0.00 26.993±26.15 N/A N/A 7.883±2.88 N/A 1.261±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0005EQ CIL_0005EQ_0003 CGP 16:18052860-18090203

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004657 ISS proline dehydrogenase activity
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006562 IEA proline catabolic process
GO:0010133 IEA proline catabolic process to glutamate
GO:0016597 IEA amino acid binding
GO:0055114 IEA oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044804 prodha proline dehydrogenase (oxidase) 1a protein_coding Danio_rerio
ENSDARG00000086512 protein_coding Danio_rerio
ENSDARG00000086746 protein_coding Danio_rerio
ENSG00000100033 PRODH proline dehydrogenase (oxidase) 1 protein_coding Homo_sapiens
ENSG00000277196 PRODH proline dehydrogenase (oxidase) 1 protein_coding Homo_sapiens

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