C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA methyltransferase 10A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004127 Trmt10a 10090 + 3:138143448-138159821 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040321 Trmt10a-001 138143448-138159821 protein_coding
  ENSMUST00000159481 Trmt10a-004 138143861-138148464 protein_coding
  ENSMUST00000159622 Trmt10a-006 138143799-138148362 protein_coding
  ENSMUST00000161141 Trmt10a-005 138143910-138150476 protein_coding
  ENSMUST00000161791 Trmt10a-003 138143469-138155818 retained_intron
  ENSMUST00000162864 Trmt10a-002 138143517-138159818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040321ENSMUST00000159481ENSMUST00000161141ENSMUST00000161791ENSMUST00000162864
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040321 0.961±0.21 0.992±0.52 1.168±0.33 1.386±0.70 0.696±0.18 0.706±0.19 0.301±0.08 0.771±0.28 1.464±1.12 0.610±0.16 0.292±0.10 1.207±0.37 1.889±0.97 8.404±3.91
ENSMUST00000159481 N/A N/A N/A 4.048±0.00 N/A N/A N/A N/A N/A N/A 0.653±0.00 6.387±0.00 N/A 222.159±0.00
ENSMUST00000161141 N/A N/A N/A 7.314±0.00 N/A N/A N/A N/A N/A N/A N/A 18.487±0.00 32.380±22.21 89.251±0.00
ENSMUST00000161791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.01 N/A 0.353±0.00 N/A
ENSMUST00000162864 0.307±0.00 0.506±0.19 0.348±0.12 N/A 0.607±0.33 0.510±0.19 0.362±0.00 0.293±0.02 0.268±0.04 0.335±0.00 0.067±0.02 2.089±0.00 N/A 1.793±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008168 IEA methyltransferase activity
GO:0010960 IMP magnesium ion homeostasis
GO:0032259 IEA methylation
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036678 TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSG00000145331 TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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