C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EMG1 nucleolar protein homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004268 Emg1 10090 - 6:124704381-124712178 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004379 Emg1-001 124704381-124712178 protein_coding
  ENSMUST00000125795 Emg1-004 124704382-124705659 processed_transcript
  ENSMUST00000141251 Emg1-002 124704951-124712141 retained_intron
  ENSMUST00000142187 Emg1-003 124704458-124712069 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000004379
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000004379 38.383±0.43 34.314±4.20 30.358±18.45 31.867±2.90 23.472±1.26 24.866±0.52 31.743±0.25 62.908±30.77 23.708±1.73 32.733±3.17 39.765±7.32 45.762±10.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0017126 IMP nucleologenesis
GO:0019843 IEA rRNA binding
GO:0031167 ISS rRNA methylation
GO:0070037 ISS rRNA (pseudouridine) methyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056914 EMG1 EMG1 N1-specific pseudouridine methyltransferase protein_coding Danio_rerio
ENSG00000126749 EMG1 EMG1 N1-specific pseudouridine methyltransferase protein_coding Homo_sapiens
ENSG00000268439 RP3-461F17.3 cDNA FLJ60792, highly similar to Probable ribosome biogenesis protein NEP1 {ECO:0000313|EMBL:BAG60889.1} protein_coding Homo_sapiens

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