C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mucolipin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004567 Mcoln1 10090 + 8:3500457-3515232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004683 Mcoln1-001 3500457-3515232 protein_coding
  ENSMUST00000159538 Mcoln1-004 3511596-3512807 retained_intron
  ENSMUST00000159808 Mcoln1-005 3510667-3513022 retained_intron
  ENSMUST00000160338 Mcoln1-003 3500504-3506941 protein_coding
  ENSMUST00000161705 Mcoln1-007 3514562-3515232 retained_intron
  ENSMUST00000161842 Mcoln1-006 3512682-3515224 retained_intron
  ENSMUST00000162797 Mcoln1-002 3505779-3515232 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004683ENSMUST00000159808ENSMUST00000160338ENSMUST00000161705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004683 31.937±9.58 86.020±8.32 24.382±5.16 23.046±12.56 36.801±12.74 34.952±10.86 16.098±2.13 50.834±4.86 21.806±9.47 40.288±2.81 9.579±1.05 33.935±16.50 23.558±13.58 6.258±3.10
ENSMUST00000159808 36.550±1.85 N/A N/A N/A 43.860±5.36 46.433±16.05 13.751±0.95 35.273±5.83 22.872±7.78 33.836±3.36 N/A 71.015±9.60 N/A 8.068±1.37
ENSMUST00000160338 N/A 221.303±104.85 N/A N/A 112.922±23.24 71.773±18.93 N/A 96.010±0.00 50.543±6.67 83.024±30.77 N/A 80.856±15.55 N/A N/A
ENSMUST00000161705 N/A N/A N/A 13.203±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043C CIL_00043C_0002 CGP 8:3493138-3515232

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005261 ISA cation channel activity
GO:0005737 IEA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005770 ISA late endosome
GO:0005886 IEA plasma membrane
GO:0006812 ISA cation transport
GO:0016020 ISA membrane
GO:0016021 IEA integral component of membrane
GO:0016197 ISA endosomal transport
GO:0043235 ISO receptor complex
GO:0051209 IEA release of sequestered calcium ion into cytosol
GO:0070588 IEA calcium ion transmembrane transport
GO:0072345 IEA NAADP-sensitive calcium-release channel activity
GO:0098655 ISA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002285 mcoln1a mucolipin 1a protein_coding Danio_rerio
ENSDARG00000058848 mcoln1b mucolipin 1b protein_coding Danio_rerio
ENSG00000090674 MCOLN1 mucolipin 1 protein_coding Homo_sapiens

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