C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calponin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004665 Cnn2 10090 + 10:79988584-79996062 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004784 Cnn2-001 79988584-79996062 protein_coding
  ENSMUST00000105374 Cnn2-002 79988623-79994684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004784ENSMUST00000105374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004784 50.029±31.97 16.653±4.89 71.865±6.79 5.942±3.65 75.457±29.49 33.248±7.85 19.041±2.89 19.686±1.70 9.195±6.63 180.593±21.55 1.919±0.36 82.102±33.98 72.014±16.54 2.287±1.16
ENSMUST00000105374 9.087±0.00 13.395±2.66 N/A 2.485±0.26 43.257±13.73 14.203±3.06 N/A 7.248±0.00 N/A N/A 1.103±0.15 52.145±9.48 99.113±27.99 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0000I1 CIL_0000I1_0002 CGP 10:79974948-79996062
CIL_0000I2 CIL_0000I2_0002 CGP 10:79988584-80015572

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001725 ISO stress fiber
GO:0003779 IEA actin binding
GO:0005516 IEA calmodulin binding
GO:0005925 IEA focal adhesion
GO:0010628 IMP positive regulation of gene expression
GO:0016020 IEA membrane
GO:0030097 IMP hemopoiesis
GO:0030336 IMP negative regulation of cell migration
GO:0031032 IEA actomyosin structure organization
GO:0032970 ISO regulation of actin filament-based process
GO:0042060 IMP wound healing
GO:0042127 IMP regulation of cell proliferation
GO:0050765 IMP negative regulation of phagocytosis
GO:0070062 IEA extracellular vesicular exosome
GO:0071260 ISO cellular response to mechanical stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035858 cnn2 calponin 2 protein_coding Danio_rerio
ENSG00000064666 CNN2 calponin 2 protein_coding Homo_sapiens

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