C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-sulfoglucosamine sulfohydrolase (sulfamidase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005043 Sgsh 10090 - 11:119343425-119355536 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005173 Sgsh-001 119343482-119355536 protein_coding
  ENSMUST00000100172 Sgsh-006 119343498-119355510 protein_coding
  ENSMUST00000126132 Sgsh-005 119346418-119347861 processed_transcript
  ENSMUST00000133507 Sgsh-002 119346242-119355530 processed_transcript
  ENSMUST00000136523 Sgsh-003 119343425-119355502 nonsense_mediated_decay
  ENSMUST00000141540 Sgsh-004 119346799-119352699 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005173ENSMUST00000100172ENSMUST00000133507ENSMUST00000136523
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005173 7.696±0.67 14.815±0.87 4.922±1.71 0.640±0.14 8.169±2.96 9.466±0.94 1.955±0.48 5.476±1.53 1.609±0.65 11.402±0.04 0.962±0.36 7.231±3.03 4.348±1.55 3.366±0.21
ENSMUST00000100172 N/A N/A N/A 0.779±0.00 1.088±0.00 N/A 0.418±0.00 N/A 0.314±0.13 N/A 0.464±0.00 1.314±0.43 2.236±0.54 0.462±0.00
ENSMUST00000133507 6.658±1.26 13.241±1.99 N/A 0.829±0.16 12.049±2.58 6.898±0.87 1.765±0.23 5.387±1.45 1.732±0.49 12.647±2.04 N/A 10.358±2.30 N/A 2.363±0.36
ENSMUST00000136523 N/A N/A N/A 0.494±0.00 N/A N/A N/A N/A N/A N/A N/A 1.849±0.58 0.599±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031S CIL_00031S_0002 CGP 11:119288363-119345375
CIL_00042E CIL_00042E_0002 CGP 11:119307768-119355536
CIL_00042F CIL_00042F_0002 CGP 11:119343425-119381079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005764 TAS lysosome
GO:0008484 ISS sulfuric ester hydrolase activity
GO:0030201 TAS heparan sulfate proteoglycan metabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032087 sgsh N-sulfoglucosamine sulfohydrolase (sulfamidase) protein_coding Danio_rerio
ENSG00000181523 SGSH N-sulfoglucosamine sulfohydrolase protein_coding Homo_sapiens

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