C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 30 (zinc transporter), member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005802 Slc30a4 10090 - 2:122681233-122702663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005952 Slc30a4-001 122681233-122702639 protein_coding
  ENSMUST00000099457 Slc30a4-002 122683398-122702663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005952ENSMUST00000099457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005952 5.150±1.09 2.574±0.46 4.000±0.30 4.509±0.76 3.824±1.86 4.734±2.14 1.769±0.37 2.818±0.21 1.004±0.33 2.756±0.20 2.925±0.79 4.243±2.05 10.949±5.10 5.653±2.77
ENSMUST00000099457 N/A 9.048±2.56 N/A N/A 1.826±0.37 4.725±2.22 N/A N/A N/A 1.070±0.00 N/A 3.496±1.12 3.201±0.00 12.437±5.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C8 CIL_0004C8_0003 CGP 2:122636986-122702663
CIL_0004QN CIL_0004QN_0003 CGP 2:122681233-122749475

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005770 IEA late endosome
GO:0006829 IEA zinc ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0009636 IEA response to toxic substance
GO:0016021 IEA integral component of membrane
GO:0055069 IMP zinc ion homeostasis
GO:0061088 IEA regulation of sequestering of zinc ion
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007180 slc30a4 solute carrier family 30 (zinc transporter), member 4 protein_coding Danio_rerio
ENSG00000104154 SLC30A4 solute carrier family 30 (zinc transporter), member 4 protein_coding Homo_sapiens

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