C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane BAX inhibitor motif containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006301 Tmbim1 10090 - 1:74288247-74305622 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016309 Tmbim1-001 74288247-74304405 protein_coding
  ENSMUST00000113796 Tmbim1-002 74288253-74304361 protein_coding
  ENSMUST00000128505 Tmbim1-008 74289300-74291228 protein_coding
  ENSMUST00000130763 Tmbim1-006 74293910-74305622 protein_coding
  ENSMUST00000135384 Tmbim1-003 74288251-74304351 retained_intron
  ENSMUST00000141560 Tmbim1-005 74293927-74304120 protein_coding
  ENSMUST00000152603 Tmbim1-004 74288251-74295695 retained_intron
  ENSMUST00000154859 Tmbim1-007 74293562-74304215 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016309ENSMUST00000113796ENSMUST00000135384ENSMUST00000152603ENSMUST00000154859
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016309 33.966±9.74 28.119±1.15 23.829±11.88 1.259±0.45 32.999±8.05 52.300±17.08 18.332±3.41 11.868±0.41 9.995±4.15 67.333±2.50 19.521±2.16 22.824±5.59 17.385±7.65 1.255±0.56
ENSMUST00000113796 N/A N/A N/A 0.154±0.02 N/A N/A N/A N/A 0.403±0.09 N/A N/A 0.804±0.31 N/A 0.134±0.04
ENSMUST00000135384 N/A N/A N/A 0.278±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.254±0.17
ENSMUST00000152603 N/A N/A 6.661±0.32 0.402±0.13 N/A N/A N/A N/A 0.960±0.00 N/A N/A 3.431±0.15 N/A N/A
ENSMUST00000154859 58.158±13.59 170.966±14.95 N/A N/A 81.951±4.47 159.396±33.42 34.401±1.34 22.668±6.42 20.862±4.93 133.330±13.88 N/A 54.745±10.32 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005VJ CIL_0005VJ_0002 CGP 1:74279840-74353694
CIL_0005VI CIL_0005VI_0002 CGP 1:74284930-74353694
CIL_0005VH CIL_0005VH_0002 CGP 1:74288247-74369321

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005123 IEA death receptor binding
GO:0005765 IEA lysosomal membrane
GO:0005794 IEA Golgi apparatus
GO:0010008 IEA endosome membrane
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome
GO:0090005 IEA negative regulation of establishment of protein localization to plasma membrane
GO:1902042 IEA negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:1902045 IEA negative regulation of Fas signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058323 tmbim1 transmembrane BAX inhibitor motif containing 1 protein_coding Danio_rerio
ENSDARG00000090534 TMBIM1 (2 of 2) transmembrane BAX inhibitor motif containing 1 protein_coding Danio_rerio
ENSG00000135926 TMBIM1 transmembrane BAX inhibitor motif containing 1 protein_coding Homo_sapiens

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