C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chaperonin containing Tcp1, subunit 4 (delta)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007739 Cct4 10090 + 11:22990519-23003780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020562 Cct4-004 22990650-23003151 protein_coding
  ENSMUST00000145912 Cct4-002 23000937-23001619 processed_transcript
  ENSMUST00000173853 Cct4-005 22990626-22994389 nonsense_mediated_decay
  ENSMUST00000173867 Cct4-001 22990519-23003780 protein_coding
  ENSMUST00000174047 Cct4-008 22990650-22997096 nonsense_mediated_decay
  ENSMUST00000174244 Cct4-003 22990639-22999876 retained_intron
  ENSMUST00000174659 Cct4-006 22990652-22997149 nonsense_mediated_decay
  ENSMUST00000174689 Cct4-009 23001934-23002855 retained_intron
  ENSMUST00000174746 Cct4-007 22995624-22997101 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020562ENSMUST00000173853ENSMUST00000173867ENSMUST00000174047ENSMUST00000174244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020562 16.510±2.23 N/A N/A 21.262±3.99 14.268±0.97 12.526±3.52 10.040±0.86 14.516±2.51 13.182±1.95 13.164±0.55 15.366±3.45 27.184±20.92 87.333±55.70 40.159±37.60
ENSMUST00000173853 67.991±5.17 31.610±4.67 N/A N/A 34.205±7.50 48.354±12.36 15.282±0.46 33.177±8.93 15.935±6.75 28.174±3.16 N/A 27.259±11.45 N/A 76.577±8.67
ENSMUST00000173867 16.957±2.29 10.136±1.00 16.822±0.52 23.357±9.40 9.798±2.71 6.798±1.15 10.515±0.74 11.741±2.24 15.373±11.28 8.790±2.51 10.111±1.46 14.390±5.34 30.578±14.12 28.724±6.98
ENSMUST00000174047 N/A 199.859±21.35 N/A N/A 71.128±14.49 67.589±27.60 N/A 51.392±0.00 29.172±18.79 40.020±2.79 N/A 97.551±64.34 N/A 40.840±0.00
ENSMUST00000174244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.613±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002199 IDA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005832 IDA chaperonin-containing T-complex
GO:0005874 IEA microtubule
GO:0006457 IEA protein folding
GO:0007339 IDA binding of sperm to zona pellucida
GO:0044297 IDA cell body
GO:0044822 IEA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013475 cct4 chaperonin containing TCP1, subunit 4 (delta) protein_coding Danio_rerio
ENSG00000115484 CCT4 chaperonin containing TCP1, subunit 4 (delta) protein_coding Homo_sapiens

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