C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700109H08 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000008307 1700109H08Rik 10090 + 5:3571566-3584356 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000008451 1700109H08Rik-001 3571673-3584356 protein_coding
  ENSMUST00000125740 1700109H08Rik-003 3575688-3584356 protein_coding
  ENSMUST00000147801 1700109H08Rik-002 3571566-3584341 nonsense_mediated_decay
  ENSMUST00000156973 1700109H08Rik-004 3580498-3584344 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000008451ENSMUST00000125740ENSMUST00000147801
Transcript ID Testis
ENSMUST00000008451 117.293±0.00
ENSMUST00000125740 724.749±0.00
ENSMUST00000147801 48.257±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061377 efcab1 EF-hand calcium binding domain 1 protein_coding Danio_rerio

Loading