C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 72 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000008958 Vps72 10090 + 3:95111022-95123051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009102 Vps72-001 95111022-95123051 protein_coding
  ENSMUST00000125548 Vps72-004 95111073-95122721 processed_transcript
  ENSMUST00000136076 Vps72-003 95111042-95118377 processed_transcript
  ENSMUST00000139296 Vps72-002 95114662-95119183 processed_transcript
  ENSMUST00000152333 Vps72-005 95116526-95119302 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009102ENSMUST00000125548ENSMUST00000136076ENSMUST00000152333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009102 16.087±8.08 28.037±1.56 20.457±1.91 41.895±8.79 22.497±6.13 30.576±6.94 10.747±2.51 16.566±1.68 12.468±2.69 25.534±0.52 24.217±2.56 34.728±12.98 39.274±18.76 13.624±1.37
ENSMUST00000125548 8.647±3.05 11.999±1.42 14.737±2.01 22.504±3.91 9.986±2.28 13.946±1.18 3.875±0.06 6.554±1.52 7.837±3.01 N/A 9.546±2.37 22.041±9.27 19.141±8.30 3.059±0.00
ENSMUST00000136076 N/A N/A N/A 40.713±0.00 N/A N/A N/A N/A N/A N/A N/A 114.063±0.00 80.395±2.17 41.513±0.00
ENSMUST00000152333 N/A N/A N/A N/A 2.634±0.00 N/A N/A N/A N/A N/A N/A 3.622±0.04 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064I CIL_00064I_0002 CGP 3:95111022-95129209

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0035019 IDA somatic stem cell maintenance
GO:0043234 ISS protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063718 vps72 vacuolar protein sorting 72 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSDARG00000088567 VPS72 (2 of 2) vacuolar protein sorting 72 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000163159 VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) protein_coding Homo_sapiens

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