C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanine nucleotide binding protein, alpha transducing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009108 Gnat2 10090 + 3:108092789-108101432 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058669 Gnat2-001 108092789-108101432 protein_coding
  ENSMUST00000130013 Gnat2-002 108097243-108101291 processed_transcript
  ENSMUST00000131856 Gnat2-004 108094448-108098432 protein_coding
  ENSMUST00000142568 Gnat2-005 108093192-108101430 retained_intron
  ENSMUST00000145101 Gnat2-003 108092880-108096384 protein_coding
  ENSMUST00000151326 Gnat2-006 108093138-108098417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058669ENSMUST00000130013ENSMUST00000131856ENSMUST00000142568ENSMUST00000145101ENSMUST00000151326
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058669 0.145±0.07 N/A N/A 0.018±0.00 N/A N/A N/A 0.053±0.00 0.286±0.05 N/A 0.126±0.00 0.212±0.09 0.447±0.42 0.044±0.00
ENSMUST00000130013 0.113±0.02 N/A 0.091±0.01 N/A 0.159±0.09 0.369±0.14 0.046±0.02 0.107±0.03 0.354±0.25 0.049±0.01 0.252±0.08 0.525±0.07 0.970±0.52 0.095±0.02
ENSMUST00000131856 0.162±0.06 N/A N/A N/A 0.047±0.00 N/A N/A 0.051±0.00 N/A N/A N/A 0.442±0.22 N/A 0.047±0.00
ENSMUST00000142568 0.027±0.01 0.750±0.00 0.022±0.00 0.012±0.00 0.085±0.00 0.079±0.00 N/A N/A 0.109±0.04 N/A N/A 0.132±0.07 0.236±0.17 0.098±0.00
ENSMUST00000145101 N/A N/A 0.053±0.00 0.146±0.00 N/A N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A 0.134±0.00
ENSMUST00000151326 0.027±0.00 5.011±1.40 0.059±0.00 N/A 0.134±0.07 1.258±0.30 N/A 0.206±0.09 0.456±0.20 0.112±0.06 0.237±0.01 0.806±0.36 1.565±1.31 0.206±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001580 IBA detection of chemical stimulus involved in sensory perception of bitter taste
GO:0001664 IBA G-protein coupled receptor binding
GO:0001750 IBA photoreceptor outer segment
GO:0001917 IBA photoreceptor inner segment
GO:0003924 IBA GTPase activity
GO:0005525 IEA GTP binding
GO:0005834 IBA heterotrimeric G-protein complex
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007188 IBA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007199 TAS G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007601 IMP visual perception
GO:0007602 TAS phototransduction
GO:0008020 IBA G-protein coupled photoreceptor activity
GO:0009642 IEA response to light intensity
GO:0016020 TAS membrane
GO:0031683 IBA G-protein beta/gamma-subunit complex binding
GO:0046549 IMP retinal cone cell development
GO:0046872 IEA metal ion binding
GO:0050908 IMP detection of light stimulus involved in visual perception

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042529 gnat2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 protein_coding Danio_rerio
ENSG00000134183 GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 protein_coding Homo_sapiens

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