C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myelin transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000010505 Myt1 10090 + 2:181763332-181827797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081125 Myt1-001 181763332-181827797 protein_coding
  ENSMUST00000108756 Myt1-002 181767042-181827768 protein_coding
  ENSMUST00000108757 Myt1-003 181767322-181827768 protein_coding
  ENSMUST00000129843 Myt1-006 181797576-181827768 protein_coding
  ENSMUST00000129856 Myt1-005 181782541-181815613 protein_coding
  ENSMUST00000130079 Myt1-007 181796307-181827732 retained_intron
  ENSMUST00000135744 Myt1-011 181811197-181820099 protein_coding
  ENSMUST00000142245 Myt1-010 181797598-181806539 processed_transcript
  ENSMUST00000148766 Myt1-012 181819559-181821997 retained_intron
  ENSMUST00000156190 Myt1-008 181767029-181795892 processed_transcript
  ENSMUST00000183403 Myt1-009 181767303-181805009 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000081125ENSMUST00000108756ENSMUST00000108757ENSMUST00000129843ENSMUST00000129856ENSMUST00000130079ENSMUST00000135744ENSMUST00000142245ENSMUST00000148766ENSMUST00000183403
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000081125 N/A N/A 12.345±2.66 N/A N/A N/A 0.019±0.00 0.065±0.00 N/A N/A N/A 1.034±0.00
ENSMUST00000108756 N/A N/A 6.745±3.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108757 0.196±0.07 0.006±0.00 1.710±1.05 N/A 0.180±0.07 0.016±0.01 N/A N/A N/A 0.033±0.01 0.014±0.00 N/A
ENSMUST00000129843 0.168±0.00 N/A 3.851±2.41 0.030±0.02 0.255±0.18 N/A 0.017±0.00 0.004±0.00 0.012±0.00 0.076±0.05 0.004±0.00 0.610±0.30
ENSMUST00000129856 0.344±0.14 N/A 1.504±0.00 N/A 0.263±0.14 N/A 0.036±0.01 0.016±0.01 0.018±0.00 0.086±0.01 0.005±0.00 0.842±0.00
ENSMUST00000130079 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 0.060±0.01 N/A N/A
ENSMUST00000135744 N/A N/A N/A N/A 0.654±0.00 N/A N/A N/A N/A N/A 0.076±0.00 N/A
ENSMUST00000142245 N/A 0.047±0.00 N/A N/A 0.322±0.01 N/A N/A N/A N/A 0.253±0.00 N/A N/A
ENSMUST00000148766 N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.039±0.02 N/A
ENSMUST00000183403 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.033±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I7 CIL_0007I7_0002 CGP 2:181763332-181857461

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001158 IDA enhancer sequence-specific DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IEA nervous system development
GO:0008270 IEA zinc ion binding
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074030 myt1a myelin transcription factor 1a protein_coding Danio_rerio
ENSDARG00000089464 myt1b myelin transcription factor 1b protein_coding Danio_rerio
ENSG00000196132 MYT1 myelin transcription factor 1 protein_coding Homo_sapiens

Loading