C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700006E09 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000010841 1700006E09Rik 10090 + 11:101984279-101992264 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000010985 1700006E09Rik-001 101987056-101992264 protein_coding
  ENSMUST00000175972 1700006E09Rik-003 101984284-101990850 protein_coding
  ENSMUST00000176722 1700006E09Rik-002 101984279-101992256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverOvaryPlacentaTestisENSMUST00000010985ENSMUST00000175972ENSMUST00000176722
Transcript ID Adipose Adrenal Brain Breast Colon Liver Ovary Placenta Testis
ENSMUST00000010985 N/A N/A N/A N/A N/A N/A N/A N/A 59.675±9.66
ENSMUST00000175972 0.449±0.00 0.436±0.02 0.219±0.00 0.725±0.24 0.521±0.00 0.188±0.00 1.405±0.00 N/A N/A
ENSMUST00000176722 N/A N/A 0.141±0.00 N/A N/A 0.028±0.00 N/A 0.010±0.00 219.387±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0002 VISTA 11:101501412-102102123
CIL_00090X CIL_00090X_0002 VISTA 11:101529827-102131014
CIL_000997 CIL_000997_0002 VISTA 11:101567301-102168287
CIL_0001CB CIL_0001CB_0002 CGP 11:101962458-101987013
CIL_00059Q CIL_00059Q_0002 CGP 11:101971143-101992264
CIL_0001CF CIL_0001CF_0002 CGP 11:101984279-102028461

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089687 C25H17orf105 (1 of 2) chromosome 17 open reading frame 105 protein_coding Danio_rerio
ENSDARG00000093739 C9H17orf105 (2 of 2) chromosome 17 open reading frame 105 protein_coding Danio_rerio
ENSG00000231256 C17orf105 chromosome 17 open reading frame 105 protein_coding Homo_sapiens

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