C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lymphocyte antigen 6 complex, locus G6E
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000013766 Ly6g6e 10090 + 17:35076902-35078804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000013910 Ly6g6e-001 35076937-35078804 protein_coding
  ENSMUST00000172494 Ly6g6e-003 35076902-35078294 protein_coding
  ENSMUST00000172678 Ly6g6e-004 35076931-35078550 protein_coding
  ENSMUST00000172959 Ly6g6e-002 35077155-35078285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000013910ENSMUST00000172678ENSMUST00000172959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000013910 0.633±0.00 N/A 0.827±0.21 0.956±0.80 0.851±0.39 8.830±1.56 N/A 0.229±0.03 0.087±0.02 2.172±1.52 0.244±0.14 2.062±1.05 0.248±0.18 0.140±0.06
ENSMUST00000172678 0.480±0.28 0.099±0.03 3.037±0.13 1.086±0.84 1.302±0.50 20.584±3.67 0.165±0.04 0.665±0.25 0.138±0.05 3.645±2.13 0.412±0.39 3.289±1.22 0.159±0.00 0.222±0.06
ENSMUST00000172959 0.178±0.00 0.303±0.06 N/A N/A 0.726±0.00 N/A 0.096±0.00 0.869±0.02 0.164±0.01 2.490±0.00 0.320±0.08 3.297±0.00 0.288±0.00 0.248±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041Z CIL_00041Z_0002 CGP 17:35076902-35085610

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005024 IEA transforming growth factor beta-activated receptor activity
GO:0005575 ND cellular_component
GO:0007178 IEA transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204422 XXbac-BPG32J3.20 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000475702} protein_coding Homo_sapiens
ENSG00000255552 LY6G6E lymphocyte antigen 6 complex, locus G6E (pseudogene) protein_coding Homo_sapiens

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