C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ganglioside-induced differentiation-associated protein 1-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017943 Gdap1l1 10090 + 2:163438476-163455324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018087 Gdap1l1-003 163438478-163454975 protein_coding
  ENSMUST00000109420 Gdap1l1-201 163438476-163455324 protein_coding
  ENSMUST00000109421 Gdap1l1-001 163438478-163453952 protein_coding
  ENSMUST00000137070 Gdap1l1-002 163438533-163453797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018087ENSMUST00000109420ENSMUST00000109421ENSMUST00000137070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018087 0.249±0.17 0.954±0.37 0.062±0.01 17.294±5.23 0.144±0.06 0.409±0.19 0.028±0.01 0.037±0.02 0.030±0.02 0.024±0.01 N/A 0.333±0.21 0.059±0.02 0.040±0.01
ENSMUST00000109420 0.092±0.00 N/A 0.072±0.00 9.984±4.94 0.088±0.00 0.322±0.10 N/A 0.040±0.01 0.034±0.03 N/A 0.029±0.00 0.258±0.15 0.033±0.00 0.047±0.03
ENSMUST00000109421 0.279±0.20 2.364±0.52 0.172±0.00 21.227±2.03 0.676±0.20 1.081±0.29 0.095±0.05 0.115±0.06 0.050±0.04 0.107±0.07 0.083±0.00 1.432±0.68 0.042±0.00 0.114±0.00
ENSMUST00000137070 0.093±0.00 N/A N/A 49.209±0.00 0.377±0.00 N/A N/A N/A 0.047±0.00 0.082±0.00 0.056±0.03 1.921±0.00 0.087±0.05 0.204±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R9 CIL_0007R9_0002 VISTA 2:163385776-163987192
CIL_00044O CIL_00044O_0002 CGP 2:163405822-163455324
CIL_00044R CIL_00044R_0002 CGP 2:163438476-163472629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028628 gdap1l1 ganglioside-induced differentiation-associated protein 1-like 1 protein_coding Danio_rerio
ENSG00000124194 GDAP1L1 ganglioside induced differentiation associated protein 1-like 1 protein_coding Homo_sapiens

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