C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: elongator acetyltransferase complex subunit 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018565 Elp5 10090 - 11:69968222-69982517 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108594 Elp5-001 69968224-69981252 protein_coding
  ENSMUST00000108595 Elp5-011 69970730-69981639 protein_coding
  ENSMUST00000123701 Elp5-002 69968228-69980263 retained_intron
  ENSMUST00000127437 Elp5-007 69969241-69980061 nonsense_mediated_decay
  ENSMUST00000138562 Elp5-003 69969515-69980261 retained_intron
  ENSMUST00000142788 Elp5-010 69968222-69980272 nonsense_mediated_decay
  ENSMUST00000143175 Elp5-009 69980035-69980696 protein_coding
  ENSMUST00000143788 Elp5-006 69970712-69980211 retained_intron
  ENSMUST00000147437 Elp5-004 69975103-69982517 protein_coding
  ENSMUST00000151766 Elp5-008 69968232-69969403 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108594ENSMUST00000123701ENSMUST00000142788ENSMUST00000151766
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108594 12.965±0.77 20.069±2.36 23.550±10.37 9.956±0.00 N/A 15.222±2.66 13.183±2.16 18.650±9.11 12.337±0.08 15.854±0.42 11.409±3.19 15.175±4.85 53.587±27.57
ENSMUST00000123701 28.666±3.85 N/A 18.560±3.66 26.156±1.87 19.861±2.36 10.377±0.00 14.017±2.46 10.004±2.27 13.783±2.62 N/A 21.537±5.37 23.854±1.41 26.408±2.24
ENSMUST00000142788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.287±0.00 N/A
ENSMUST00000151766 N/A N/A 86.187±0.00 N/A N/A N/A N/A N/A N/A N/A 75.071±0.00 126.647±22.49 145.749±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033I CIL_00033I_0002 CGP 11:69968222-69990601

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030335 IMP positive regulation of cell migration
GO:0033588 ISS Elongator holoenzyme complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067918 elp5 elongator acetyltransferase complex subunit 5 protein_coding Danio_rerio
ENSG00000170291 ELP5 elongator acetyltransferase complex subunit 5 protein_coding Homo_sapiens

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