C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coatomer protein complex, subunit zeta 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018672 Copz2 10090 + 11:96849870-96861203 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018816 Copz2-001 96849876-96861203 protein_coding
  ENSMUST00000145633 Copz2-003 96849881-96854153 nonsense_mediated_decay
  ENSMUST00000147710 Copz2-005 96854131-96861203 nonsense_mediated_decay
  ENSMUST00000154191 Copz2-004 96853900-96856940 retained_intron
  ENSMUST00000155696 Copz2-002 96849870-96851590 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018816ENSMUST00000145633ENSMUST00000147710ENSMUST00000154191ENSMUST00000155696
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018816 47.868±8.78 54.637±10.98 51.209±0.88 3.091±1.71 34.907±2.67 17.246±3.29 25.462±1.50 26.443±3.48 15.409±6.41 20.708±1.88 13.330±1.48 24.482±14.79 31.913±12.41 1.989±0.99
ENSMUST00000145633 N/A N/A N/A N/A N/A N/A N/A N/A 9.629±1.64 N/A N/A N/A N/A N/A
ENSMUST00000147710 N/A N/A N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A 3.371±0.45 13.847±0.53 22.940±16.80 0.380±0.00
ENSMUST00000154191 N/A N/A N/A 0.652±0.00 N/A N/A N/A N/A N/A N/A N/A 17.816±0.00 N/A 1.347±0.00
ENSMUST00000155696 N/A N/A N/A N/A N/A 2.200±0.00 N/A N/A N/A N/A N/A 3.444±0.19 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030137 ISS COPI-coated vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000005243 COPZ2 coatomer protein complex, subunit zeta 2 protein_coding Homo_sapiens

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