C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sp2 transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018678 Sp2 10090 - 11:96953340-96982959 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062652 Sp2-001 96954219-96982959 protein_coding
  ENSMUST00000107623 Sp2-003 96953473-96968665 protein_coding
  ENSMUST00000107624 Sp2-002 96953341-96977711 protein_coding
  ENSMUST00000107626 Sp2-201 96953340-96977688 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLungMuscleOvaryPlacentaTestisENSMUST00000107623ENSMUST00000107626
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000107623 5.065±1.08 4.336±0.25 N/A 5.304±0.00 5.982±0.00 1.822±0.00 N/A 1.830±0.00 N/A 11.380±2.95 6.600±0.66
ENSMUST00000107626 N/A 3.321±0.38 5.985±1.03 7.615±1.72 4.219±0.09 1.522±0.32 4.602±0.23 2.914±0.96 8.363±0.00 6.588±1.86 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0003677 ISS DNA binding
GO:0035264 IMP multicellular organism growth
GO:0042826 IEA histone deacetylase binding
GO:0046872 IEA metal ion binding
GO:0048144 IMP fibroblast proliferation
GO:0048568 IMP embryonic organ development
GO:0072358 IMP cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076763 sp2 sp2 transcription factor protein_coding Danio_rerio
ENSDARG00000090989 sp2 sp2 transcription factor protein_coding Danio_rerio
ENSG00000167182 SP2 Sp2 transcription factor protein_coding Homo_sapiens

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