C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: colony stimulating factor 2 (granulocyte-macrophage)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018916 Csf2 10090 - 11:54247271-54249667 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019060 Csf2-001 54247271-54249667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000019060
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000019060 0.055±0.01 0.059±0.05 0.030±0.02 0.152±0.10 0.237±0.04 0.109±0.00 0.060±0.02 1.300±0.17 0.059±0.00 0.051±0.03 0.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001892 IMP embryonic placenta development
GO:0005125 IDA cytokine activity
GO:0005129 IEA granulocyte macrophage colony-stimulating factor receptor binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0006955 IEA immune response
GO:0008083 IEA growth factor activity
GO:0008284 IDA positive regulation of cell proliferation
GO:0010468 IMP regulation of gene expression
GO:0010628 IEA positive regulation of gene expression
GO:0010744 IEA positive regulation of macrophage derived foam cell differentiation
GO:0032747 IEA positive regulation of interleukin-23 production
GO:0042045 IEA epithelial fluid transport
GO:0042116 IEA macrophage activation
GO:0042127 IGI regulation of cell proliferation
GO:0042523 IEA positive regulation of tyrosine phosphorylation of Stat5 protein
GO:0043011 IDA myeloid dendritic cell differentiation
GO:0045740 IEA positive regulation of DNA replication
GO:0045918 IEA negative regulation of cytolysis
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071803 IEA positive regulation of podosome assembly
GO:0097028 IEA dendritic cell differentiation
GO:2001240 IEA negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164400 CSF2 colony stimulating factor 2 (granulocyte-macrophage) protein_coding Homo_sapiens

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