C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier, glutamate), member 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019082 Slc25a22 10090 - 7:141429739-141437892 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019226 Slc25a22-001 141429744-141437892 protein_coding
  ENSMUST00000106006 Slc25a22-003 141429749-141437631 protein_coding
  ENSMUST00000106007 Slc25a22-002 141429739-141434594 protein_coding
  ENSMUST00000124266 Slc25a22-005 141429752-141437638 nonsense_mediated_decay
  ENSMUST00000132635 Slc25a22-011 141432585-141435324 retained_intron
  ENSMUST00000133021 Slc25a22-009 141433930-141434543 protein_coding
  ENSMUST00000133206 Slc25a22-018 141433597-141434604 protein_coding
  ENSMUST00000136354 Slc25a22-010 141431626-141434402 protein_coding
  ENSMUST00000138865 Slc25a22-006 141431599-141435397 protein_coding
  ENSMUST00000140602 Slc25a22-004 141429749-141437827 retained_intron
  ENSMUST00000144174 Slc25a22-012 141431368-141432848 retained_intron
  ENSMUST00000148100 Slc25a22-013 141431020-141432055 retained_intron
  ENSMUST00000150026 Slc25a22-008 141433962-141434594 protein_coding
  ENSMUST00000153190 Slc25a22-007 141429756-141432753 processed_transcript
  ENSMUST00000156002 Slc25a22-014 141430954-141432038 retained_intron
  ENSMUST00000172654 Slc25a22-017 141432111-141437592 protein_coding
  ENSMUST00000174095 Slc25a22-015 141431186-141431598 protein_coding
  ENSMUST00000184518 Slc25a22-016 141431855-141434315 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019226ENSMUST00000106006ENSMUST00000106007ENSMUST00000124266ENSMUST00000138865ENSMUST00000140602ENSMUST00000148100ENSMUST00000172654
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019226 N/A N/A 4.465±0.00 N/A N/A N/A N/A N/A 3.403±1.79 N/A 1.287±0.00 N/A 4.000±0.00 N/A
ENSMUST00000106006 N/A N/A N/A N/A 9.976±0.45 N/A 5.909±0.13 3.102±0.00 N/A 3.720±0.00 N/A 6.429±0.00 3.272±0.72 N/A
ENSMUST00000106007 13.101±6.03 39.058±2.76 5.476±0.50 25.736±0.75 17.945±1.80 11.857±5.12 6.535±1.34 7.621±1.29 23.269±24.59 7.254±1.35 2.458±1.42 14.685±2.93 8.911±2.19 0.817±0.21
ENSMUST00000124266 5.826±0.00 17.485±2.70 N/A 14.240±0.00 9.943±3.32 6.151±1.97 N/A 3.446±0.30 3.994±2.14 4.902±1.25 0.891±0.26 6.412±2.14 2.780±0.06 0.805±0.25
ENSMUST00000138865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.888±0.00
ENSMUST00000140602 6.935±1.52 10.479±0.40 2.067±0.00 13.213±0.80 5.713±1.94 4.484±0.53 3.539±0.09 1.994±0.43 8.270±5.87 3.822±0.33 0.631±0.08 6.466±2.62 3.953±0.34 0.431±0.38
ENSMUST00000148100 N/A N/A N/A 21.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172654 N/A N/A N/A 87.761±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZC CIL_0005ZC_0002 CGP 7:141426446-141437892
CIL_0005X0 CIL_0005X0_0002 CGP 7:141429739-141444025

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005313 ISS L-glutamate transmembrane transporter activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0006810 IEA transport
GO:0015293 IEA symporter activity
GO:0015813 ISS L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020718 SLC25A22 (1 of 2) solute carrier family 25 (mitochondrial carrier: glutamate), member 22 protein_coding Danio_rerio
ENSDARG00000058336 SLC25A22 (2 of 2) solute carrier family 25 (mitochondrial carrier: glutamate), member 22 protein_coding Danio_rerio
ENSG00000177542 SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22 protein_coding Homo_sapiens

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