C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/threonine/tyrosine interacting-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019178 Styxl1 10090 - 5:135747220-135778385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053906 Styxl1-004 135747220-135778238 protein_coding
  ENSMUST00000111161 Styxl1-201 135747649-135778291 protein_coding
  ENSMUST00000111162 Styxl1-005 135747737-135778291 protein_coding
  ENSMUST00000111163 Styxl1-002 135747586-135778301 protein_coding
  ENSMUST00000111164 Styxl1-001 135747629-135778385 protein_coding
  ENSMUST00000142343 Styxl1-003 135747649-135778291 nonsense_mediated_decay
  ENSMUST00000177559 Styxl1-006 135747521-135778250 protein_coding
  ENSMUST00000178515 Styxl1-202 135747221-135778385 protein_coding
  ENSMUST00000178796 Styxl1-007 135757129-135778369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053906ENSMUST00000111162ENSMUST00000111163ENSMUST00000111164ENSMUST00000142343ENSMUST00000177559ENSMUST00000178515ENSMUST00000178796
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053906 N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A 0.212±0.06 N/A N/A
ENSMUST00000111162 N/A 0.153±0.05 0.014±0.00 0.208±0.08 0.131±0.05 0.043±0.00 0.203±0.14 0.105±0.05 0.251±0.07 0.073±0.03 0.690±0.03 0.159±0.02 N/A
ENSMUST00000111163 N/A 0.103±0.00 0.009±0.00 N/A N/A N/A 0.025±0.00 N/A 0.195±0.04 N/A 0.384±0.19 N/A 6.609±0.00
ENSMUST00000111164 0.129±0.02 0.344±0.06 0.019±0.00 0.111±0.00 0.077±0.02 0.036±0.01 0.142±0.02 0.037±0.01 0.453±0.15 N/A 0.649±0.37 0.119±0.06 22.373±1.10
ENSMUST00000142343 N/A N/A N/A N/A N/A N/A N/A 0.179±0.04 0.248±0.00 N/A 0.582±0.33 0.172±0.00 N/A
ENSMUST00000177559 N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A 0.238±0.00 N/A 0.653±0.00 0.040±0.00 2.616±0.00
ENSMUST00000178515 N/A N/A N/A N/A N/A N/A N/A 0.044±0.01 N/A N/A 0.275±0.05 0.072±0.02 4.368±0.00
ENSMUST00000178796 N/A 0.112±0.00 0.135±0.00 0.401±0.01 N/A 0.054±0.00 0.239±0.00 0.188±0.00 N/A 0.091±0.00 0.979±0.31 0.458±0.29 29.821±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NR CIL_0006NR_0002 CGP 5:135735485-135778385
CIL_0006NU CIL_0006NU_0002 CGP 5:135747220-135790398

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026338 styxl1 serine/threonine/tyrosine interacting-like 1 protein_coding Danio_rerio
ENSG00000127952 STYXL1 serine/threonine/tyrosine interacting-like 1 protein_coding Homo_sapiens

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