C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TLC domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019437 Tlcd1 10090 + 11:78176711-78181909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092880 Tlcd1-007 78178651-78181909 protein_coding
  ENSMUST00000098545 Tlcd1-008 78176711-78180480 protein_coding
  ENSMUST00000108338 Tlcd1-004 78178762-78179875 protein_coding
  ENSMUST00000127587 Tlcd1-001 78178685-78180820 protein_coding
  ENSMUST00000140379 Tlcd1-006 78179273-78180091 retained_intron
  ENSMUST00000141578 Tlcd1-005 78178731-78179607 retained_intron
  ENSMUST00000145507 Tlcd1-003 78178149-78180154 processed_transcript
  ENSMUST00000147819 Tlcd1-002 78178130-78179622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000092880ENSMUST00000098545ENSMUST00000108338ENSMUST00000127587ENSMUST00000141578
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000092880 9.396±0.00 9.481±1.02 N/A 9.234±1.51 3.952±0.12 N/A 6.843±0.50 5.285±1.19 4.122±0.00 3.809±0.00 N/A
ENSMUST00000098545 N/A N/A N/A N/A N/A N/A N/A 2.969±0.00 N/A N/A 5.319±2.64
ENSMUST00000108338 N/A 83.014±25.54 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127587 37.372±10.86 29.936±2.92 5.083±0.00 33.944±9.95 10.703±1.94 6.559±0.15 33.159±2.93 25.087±9.43 15.760±2.92 18.538±2.07 21.493±10.23
ENSMUST00000141578 N/A 80.682±34.06 N/A 61.687±2.77 N/A N/A 31.951±0.00 N/A N/A 26.531±6.80 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002391 tlcd1 TLC domain containing 1 protein_coding Danio_rerio
ENSG00000160606 TLCD1 TLC domain containing 1 protein_coding Homo_sapiens

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