C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GLE1 RNA export mediator (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019715 Gle1 10090 + 2:29935426-29960371 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019859 Gle1-001 29935426-29960371 protein_coding
  ENSMUST00000123608 Gle1-004 29942362-29943787 retained_intron
  ENSMUST00000124687 Gle1-006 29949030-29950655 retained_intron
  ENSMUST00000127390 Gle1-007 29955507-29958217 retained_intron
  ENSMUST00000148983 Gle1-003 29935523-29939495 retained_intron
  ENSMUST00000149730 Gle1-005 29942725-29944764 retained_intron
  ENSMUST00000154490 Gle1-002 29935428-29938955 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019859ENSMUST00000148983ENSMUST00000154490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019859 5.703±2.31 4.014±1.47 6.930±0.28 9.775±3.18 5.528±2.26 2.122±0.74 3.215±1.45 5.529±1.91 5.334±1.72 5.118±1.98 2.146±0.98 5.746±2.29 10.203±2.00 5.718±2.18
ENSMUST00000148983 N/A N/A N/A N/A 18.653±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 14.158±0.00
ENSMUST00000154490 N/A N/A N/A N/A 6.290±0.40 N/A N/A N/A 3.230±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EC CIL_0007EC_0002 CGP 2:29889221-29960371
CIL_0007EB CIL_0007EB_0002 CGP 2:29935426-30031451

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005643 IEA nuclear pore
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016973 IEA poly(A)+ mRNA export from nucleus
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043559 gle1 GLE1 RNA export mediator homolog (yeast) protein_coding Danio_rerio
ENSG00000119392 GLE1 GLE1 RNA export mediator protein_coding Homo_sapiens

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