C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calreticulin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019732 Calr3 10090 - 8:72424176-72443870 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019876 Calr3-001 72424176-72443870 protein_coding
  ENSMUST00000109974 Calr3-002 72424183-72435156 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019876ENSMUST00000109974
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019876 0.417±0.16 0.326±0.07 0.423±0.01 0.238±0.21 0.212±0.07 0.102±0.03 0.536±0.12 0.355±0.04 0.294±0.15 0.272±0.10 1.423±0.29 0.699±0.64 0.248±0.11 33.052±8.03
ENSMUST00000109974 0.381±0.02 0.248±0.08 0.139±0.03 0.386±0.30 0.174±0.00 0.526±0.00 5.245±2.61 0.249±0.06 0.174±0.12 0.325±0.05 0.316±0.08 1.231±0.28 0.175±0.07 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072E CIL_00072E_0002 CGP 8:72341001-72443870

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0006457 IEA protein folding
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0044183 IMP protein binding involved in protein folding
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020103 calrl calreticulin like protein_coding Danio_rerio
ENSDARG00000043276 calr calreticulin protein_coding Danio_rerio
ENSG00000269058 CALR3 calreticulin 3 protein_coding Homo_sapiens

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