C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and coiled coil domains 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020023 Tmcc3 10090 + 10:94311949-94590956 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065060 Tmcc3-001 94514857-94590956 protein_coding
  ENSMUST00000117460 Tmcc3-004 94550872-94588786 protein_coding
  ENSMUST00000117929 Tmcc3-003 94576263-94588801 protein_coding
  ENSMUST00000121471 Tmcc3-002 94575257-94588117 protein_coding
  ENSMUST00000132743 Tmcc3-005 94312024-94578796 protein_coding
  ENSMUST00000139230 Tmcc3-007 94312137-94375595 processed_transcript
  ENSMUST00000147869 Tmcc3-006 94311949-94430897 retained_intron
  ENSMUST00000148823 Tmcc3-008 94545431-94578922 protein_coding
  ENSMUST00000148910 Tmcc3-009 94550852-94578667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065060ENSMUST00000117460ENSMUST00000117929ENSMUST00000121471
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065060 18.815±4.66 6.771±1.92 8.142±0.34 2.608±0.68 14.212±6.03 26.535±4.38 7.908±0.62 5.665±0.71 2.217±0.65 31.078±3.26 4.418±0.29 9.654±2.93 13.458±7.68 2.101±1.18
ENSMUST00000117460 N/A N/A N/A N/A 4.799±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000117929 6.562±0.41 N/A N/A N/A 3.676±0.00 6.636±2.08 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121471 N/A N/A N/A 3.305±0.00 N/A N/A N/A N/A N/A N/A N/A 2.807±0.00 N/A 0.694±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045525 tmcc3 transmembrane and coiled-coil domain family 3 protein_coding Danio_rerio
ENSG00000057704 TMCC3 transmembrane and coiled-coil domain family 3 protein_coding Homo_sapiens

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