C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2010107G23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020083 2010107G23Rik 10090 - 10:62107655-62143920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027719 2010107G23Rik-008 62108835-62139870 protein_coding
  ENSMUST00000064050 2010107G23Rik-201 62108212-62111013 protein_coding
  ENSMUST00000124615 2010107G23Rik-003 62108210-62110968 protein_coding
  ENSMUST00000125704 2010107G23Rik-002 62107655-62111050 protein_coding
  ENSMUST00000138450 2010107G23Rik-006 62134521-62143920 processed_transcript
  ENSMUST00000141144 2010107G23Rik-010 62108920-62110496 protein_coding
  ENSMUST00000141724 2010107G23Rik-005 62108918-62143906 protein_coding
  ENSMUST00000142796 2010107G23Rik-001 62108210-62111050 protein_coding
  ENSMUST00000142821 2010107G23Rik-004 62108210-62110945 protein_coding
  ENSMUST00000150057 2010107G23Rik-007 62109947-62143910 protein_coding
  ENSMUST00000156798 2010107G23Rik-009 62108917-62134706 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064050ENSMUST00000124615ENSMUST00000125704ENSMUST00000141144ENSMUST00000142796ENSMUST00000142821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064050 0.608±0.26 2.451±0.27 2.524±0.69 11.167±3.10 0.497±0.14 3.977±0.61 N/A 1.229±0.40 0.472±0.37 1.875±0.35 0.521±0.16 2.157±1.22 1.192±0.59 0.940±0.34
ENSMUST00000124615 0.317±0.13 1.819±0.33 1.530±0.44 4.075±1.46 0.391±0.13 4.194±0.81 N/A 1.157±0.43 0.275±0.21 1.602±0.64 0.332±0.27 1.508±0.74 0.296±0.15 0.899±0.28
ENSMUST00000125704 0.801±0.46 1.470±0.45 2.979±0.27 9.206±0.00 0.962±0.25 5.702±0.96 1.072±0.42 3.480±0.44 0.412±0.27 3.497±0.15 0.144±0.06 1.074±0.45 1.552±1.02 0.875±0.43
ENSMUST00000141144 0.830±0.42 N/A N/A 9.288±0.00 0.737±0.00 N/A N/A N/A 0.381±0.32 N/A 0.257±0.02 3.600±0.00 0.549±0.33 0.320±0.00
ENSMUST00000142796 N/A 0.944±0.00 N/A N/A 1.499±0.00 N/A 0.389±0.00 N/A 0.463±0.15 N/A 0.468±0.00 N/A N/A N/A
ENSMUST00000142821 N/A N/A N/A N/A N/A N/A 0.181±0.00 2.107±0.00 N/A N/A N/A 0.732±0.06 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TI CIL_0007TI_0002 VISTA 10:61828052-62430842

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171224 C10orf35 chromosome 10 open reading frame 35 protein_coding Homo_sapiens

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