C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: junctional sarcoplasmic reticulum protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020216 Jsrp1 10090 - 10:80808496-80813498 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020435 Jsrp1-201 80808496-80811885 protein_coding
  ENSMUST00000180438 Jsrp1-003 80810183-80813498 protein_coding
  ENSMUST00000181039 Jsrp1-002 80808498-80813492 protein_coding
  ENSMUST00000181945 Jsrp1-001 80808501-80813495 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020435ENSMUST00000180438ENSMUST00000181039ENSMUST00000181945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020435 0.153±0.00 N/A N/A 5.220±0.00 0.232±0.10 0.095±0.04 0.160±0.13 0.087±0.04 0.088±0.08 0.052±0.02 N/A 2.995±0.96 0.105±0.06 1.302±1.41
ENSMUST00000180438 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A 0.069±0.00 N/A
ENSMUST00000181039 0.174±0.00 1.267±0.61 0.333±0.00 N/A 18.867±0.16 N/A 0.163±0.00 0.436±0.23 0.175±0.00 1.805±0.27 276.297±39.95 N/A 0.101±0.01 0.329±0.00
ENSMUST00000181945 N/A N/A N/A N/A N/A 0.072±0.00 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IG CIL_0001IG_0002 CGP 10:80805248-80813498
CIL_0001ID CIL_0001ID_0002 CGP 10:80808496-80829290

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 ISS skeletal muscle contraction
GO:0005515 IPI protein binding
GO:0016020 IEA membrane
GO:0016529 IDA sarcoplasmic reticulum
GO:0060314 IMP regulation of ryanodine-sensitive calcium-release channel activity
GO:0072657 IMP protein localization to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167476 JSRP1 junctional sarcoplasmic reticulum protein 1 protein_coding Homo_sapiens

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