C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LYR motif containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020268 Lyrm7 10090 - 11:54826866-54860916 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000124351 Lyrm7-004 54841132-54860609 processed_transcript
  ENSMUST00000127887 Lyrm7-006 54841092-54850486 retained_intron
  ENSMUST00000135853 Lyrm7-003 54850174-54860585 retained_intron
  ENSMUST00000141703 Lyrm7-002 54839813-54860588 nonsense_mediated_decay
  ENSMUST00000144164 Lyrm7-005 54839812-54860608 protein_coding
  ENSMUST00000148070 Lyrm7-001 54826866-54860916 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127887ENSMUST00000135853ENSMUST00000141703ENSMUST00000144164ENSMUST00000148070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.194±0.00 9.839±0.00 N/A
ENSMUST00000135853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.603±0.00 5.913±0.00 93.027±0.00
ENSMUST00000141703 0.214±0.00 N/A 0.244±0.00 N/A N/A 0.231±0.02 N/A 0.301±0.00 0.292±0.11 N/A 0.421±0.09 N/A 0.175±0.05 N/A
ENSMUST00000144164 1.409±0.21 0.856±0.25 1.121±0.08 2.463±0.53 1.795±0.71 0.587±0.28 4.893±0.58 1.566±0.23 1.000±0.35 0.457±0.22 2.907±0.42 0.667±0.29 1.647±0.74 2.446±0.09
ENSMUST00000148070 0.153±0.00 0.081±0.00 N/A N/A N/A 0.189±0.09 N/A N/A N/A 0.066±0.01 N/A 0.111±0.00 N/A 11.540±3.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079815 LYRM7 LYR motif containing 7 protein_coding Danio_rerio
ENSG00000186687 LYRM7 LYR motif containing 7 protein_coding Homo_sapiens

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