C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pseudouridylate synthase 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020280 Pus10 10090 + 11:23665674-23732876 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020520 Pus10-004 23665697-23731525 protein_coding
  ENSMUST00000058163 Pus10-002 23666007-23732876 protein_coding
  ENSMUST00000109525 Pus10-001 23665674-23732876 protein_coding
  ENSMUST00000136365 Pus10-003 23666188-23673395 retained_intron
  ENSMUST00000139646 Pus10-006 23717482-23729071 retained_intron
  ENSMUST00000142287 Pus10-007 23718556-23731398 retained_intron
  ENSMUST00000143117 Pus10-005 23666511-23673281 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020520ENSMUST00000058163ENSMUST00000109525ENSMUST00000139646
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020520 N/A N/A 5.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 10.551±0.00 7.900±0.00
ENSMUST00000058163 3.174±0.63 3.382±0.24 5.682±0.23 2.073±0.04 1.841±0.67 1.020±0.12 1.838±0.22 5.066±1.08 2.243±0.33 1.854±0.42 1.978±0.40 5.890±1.47 4.596±0.34
ENSMUST00000109525 N/A 2.294±0.00 N/A N/A N/A N/A N/A N/A N/A 1.561±0.00 3.810±0.00 4.432±0.79 N/A
ENSMUST00000139646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.197±0.00 39.902±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008033 IEA tRNA processing
GO:0008150 ND biological_process
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079973 pus10 pseudouridylate synthase 10 protein_coding Danio_rerio
ENSG00000162927 PUS10 pseudouridylate synthase 10 protein_coding Homo_sapiens

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