C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S27A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020460 Rps27a 10090 - 11:29545846-29548109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102844 Rps27a-004 29545846-29547860 protein_coding
  ENSMUST00000102845 Rps27a-003 29545846-29548109 protein_coding
  ENSMUST00000143418 Rps27a-001 29547116-29547891 processed_transcript
  ENSMUST00000147782 Rps27a-002 29545846-29546671 processed_transcript
  ENSMUST00000150739 Rps27a-005 29545899-29547882 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102844ENSMUST00000102845ENSMUST00000143418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102844 53.320±19.77 7.804±2.26 480.472±71.44 200.983±5.70 45.103±21.12 39.888±11.69 41.580±4.09 61.982±10.20 248.689±256.49 44.510±7.62 135.005±11.24 169.076±275.09 437.042±130.86 34.950±14.33
ENSMUST00000102845 47.153±23.99 1.860±0.89 292.559±68.20 155.240±23.93 18.896±3.48 30.158±5.62 28.045±2.11 32.570±5.50 199.023±206.97 35.135±4.89 58.730±11.49 45.648±62.64 207.923±107.53 38.710±1.12
ENSMUST00000143418 N/A 1.419±0.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.103±0.98 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006412 IEA translation
GO:0008150 ND biological_process
GO:0015935 IEA small ribosomal subunit
GO:0016020 IEA membrane
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032725 rps27a ribosomal protein S27a protein_coding Danio_rerio
ENSG00000143947 RPS27A ribosomal protein S27a protein_coding Homo_sapiens

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