C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: testicular cell adhesion molecule 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020712 Tcam1 10090 + 11:106276672-106288745 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044462 Tcam1-001 106276748-106288745 protein_coding
  ENSMUST00000142472 Tcam1-002 106276672-106288133 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044462ENSMUST00000142472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044462 0.129±0.00 0.017±0.00 0.022±0.00 0.042±0.01 0.050±0.02 0.031±0.00 0.016±0.00 0.025±0.01 0.017±0.00 0.014±0.00 0.072±0.01 0.155±0.07 0.094±0.05 16.191±1.54
ENSMUST00000142472 0.113±0.00 0.020±0.00 0.040±0.01 0.019±0.00 0.128±0.08 0.020±0.00 0.039±0.02 0.013±0.00 0.039±0.04 0.026±0.01 0.029±0.01 0.253±0.10 0.079±0.00 27.504±12.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0002 VISTA 11:105834084-106435839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005887 ISO integral component of plasma membrane
GO:0016337 ISO single organismal cell-cell adhesion

Homologs

No Homologs available.

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