C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2O
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020802 Ube2o 10090 - 11:116537740-116581447 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000082152 Ube2o-001 116537740-116581447 protein_coding
  ENSMUST00000134102 Ube2o-002 116537740-116544017 processed_transcript
  ENSMUST00000147851 Ube2o-003 116545751-116548841 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082152ENSMUST00000134102
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082152 5.935±1.28 2.863±0.65 4.027±0.25 19.911±6.66 3.667±1.08 3.060±0.53 5.183±0.78 2.661±0.62 6.032±6.24 5.563±0.63 4.537±1.27 11.435±2.49 23.688±13.43 9.835±2.34
ENSMUST00000134102 2.686±0.24 5.240±1.66 2.724±1.10 7.984±3.79 2.618±1.64 2.081±0.86 3.204±0.26 1.499±0.58 5.089±4.08 2.109±0.71 N/A 6.025±2.37 11.305±4.61 3.276±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00079O CIL_00079O_0002 CGP 11:116530925-116581447
CIL_0001VD CIL_0001VD_0002 CGP 11:116537740-116597680

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006513 ISS protein monoubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0030513 ISS positive regulation of BMP signaling pathway
GO:0042147 ISS retrograde transport, endosome to Golgi
GO:0044822 IEA poly(A) RNA binding
GO:0070534 ISS protein K63-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075552 UBE2O ubiquitin-conjugating enzyme E2O protein_coding Danio_rerio
ENSG00000175931 UBE2O ubiquitin-conjugating enzyme E2O protein_coding Homo_sapiens

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