C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kinesin family member 1C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020821 Kif1c 10090 + 11:70700548-70731964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072187 Kif1c-004 70700576-70730424 protein_coding
  ENSMUST00000094499 Kif1c-002 70700561-70730387 protein_coding
  ENSMUST00000102554 Kif1c-001 70700548-70731964 protein_coding
  ENSMUST00000137119 Kif1c-005 70700650-70731964 protein_coding
  ENSMUST00000152618 Kif1c-003 70700548-70707568 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072187ENSMUST00000094499ENSMUST00000102554ENSMUST00000137119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072187 9.516±2.62 N/A 11.208±4.30 1.296±0.11 8.679±2.54 N/A 18.434±2.28 6.624±0.86 4.855±3.62 7.763±0.00 54.732±9.57 5.529±1.02 4.022±0.13 0.682±0.24
ENSMUST00000094499 31.339±5.88 24.304±1.91 29.741±2.73 14.173±11.30 26.723±4.60 36.751±6.61 50.649±1.23 29.442±5.76 21.100±15.09 33.629±5.48 152.397±7.16 13.840±9.22 43.314±21.30 2.466±0.68
ENSMUST00000102554 N/A 7.349±0.00 3.777±0.26 0.806±0.00 7.546±0.00 9.509±1.09 11.349±0.00 4.543±0.22 N/A 8.641±1.29 22.185±0.23 4.180±0.67 N/A 0.437±0.01
ENSMUST00000137119 5.680±0.09 N/A 6.538±2.41 1.300±0.00 N/A N/A 12.374±0.00 N/A N/A N/A 21.753±0.68 4.104±0.00 N/A 0.512±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020Y CIL_00020Y_0002 CGP 11:70688361-70731964

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0005871 IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0006890 IDA retrograde vesicle-mediated transport, Golgi to ER
GO:0007018 IBA microtubule-based movement
GO:0008017 IEA microtubule binding
GO:0008152 IBA metabolic process
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016887 IBA ATPase activity
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054448 kif1c kinesin family member 1C protein_coding Danio_rerio
ENSG00000129250 KIF1C kinesin family member 1C protein_coding Homo_sapiens

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