C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box and leucine-rich repeat protein 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020883 Fbxl20 10090 - 11:98082556-98150403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103143 Fbxl20-001 98082556-98149612 protein_coding
  ENSMUST00000135969 Fbxl20-002 98091091-98149606 retained_intron
  ENSMUST00000146399 Fbxl20-004 98101739-98128963 processed_transcript
  ENSMUST00000147971 Fbxl20-007 98095269-98100063 protein_coding
  ENSMUST00000148473 Fbxl20-006 98127983-98128947 processed_transcript
  ENSMUST00000149327 Fbxl20-005 98109518-98128963 protein_coding
  ENSMUST00000150378 Fbxl20-003 98098422-98150403 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103143ENSMUST00000135969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103143 10.996±2.48 18.750±6.22 5.655±3.45 8.615±3.28 10.934±4.92 7.369±2.97 2.700±0.55 6.473±1.26 2.397±1.11 10.985±1.82 2.306±0.43 9.741±6.81 2.102±1.15 1.826±0.76
ENSMUST00000135969 N/A 33.404±3.62 N/A N/A N/A N/A N/A N/A 0.454±0.00 N/A 1.153±0.00 2.121±0.00 N/A 0.242±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_0007D5 CIL_0007D5_0002 CGP 11:98036623-98150403
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007D6 CIL_0007D6_0002 CGP 11:98082556-98193293

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001662 IMP behavioral fear response
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075567 fbxl20 F-box and leucine-rich repeat protein 20 protein_coding Danio_rerio
ENSG00000108306 FBXL20 F-box and leucine-rich repeat protein 20 protein_coding Homo_sapiens

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