C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sel-1 suppressor of lin-12-like (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020964 Sel1l 10090 - 12:91806043-91849157 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021347 Sel1l-001 91806043-91849157 protein_coding
  ENSMUST00000165282 Sel1l-009 91806065-91813960 processed_transcript
  ENSMUST00000166691 Sel1l-005 91808643-91849130 retained_intron
  ENSMUST00000167466 Sel1l-006 91806621-91849129 protein_coding
  ENSMUST00000167594 Sel1l-004 91819981-91849130 retained_intron
  ENSMUST00000169843 Sel1l-002 91841458-91849140 retained_intron
  ENSMUST00000171465 Sel1l-008 91815504-91818248 retained_intron
  ENSMUST00000171959 Sel1l-007 91824878-91831932 retained_intron
  ENSMUST00000172246 Sel1l-003 91832175-91849139 retained_intron
  ENSMUST00000178462 Sel1l-201 91806043-91849157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021347ENSMUST00000166691ENSMUST00000167466ENSMUST00000167594ENSMUST00000169843ENSMUST00000178462
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021347 7.084±1.08 N/A 13.705±1.40 8.140±0.80 4.073±0.93 3.172±0.64 3.550±0.40 5.082±0.71 7.161±1.61 8.637±2.25 7.153±0.50 8.279±5.12 17.769±3.29 2.527±0.99
ENSMUST00000166691 N/A N/A N/A N/A N/A N/A N/A N/A 3.842±0.00 N/A N/A N/A N/A N/A
ENSMUST00000167466 17.165±1.50 25.091±3.19 2.894±0.61 4.230±2.01 13.988±1.31 16.125±1.97 6.945±0.24 10.439±2.02 10.088±7.75 17.483±1.46 1.836±0.45 20.120±8.22 8.141±0.98 4.618±1.94
ENSMUST00000167594 N/A N/A N/A 27.577±0.00 N/A N/A N/A N/A N/A N/A N/A 35.320±0.00 34.640±3.87 7.385±0.00
ENSMUST00000169843 N/A 44.907±8.79 N/A N/A 35.069±1.01 23.733±5.22 N/A N/A N/A 38.440±7.72 N/A 52.227±18.90 N/A N/A
ENSMUST00000178462 N/A 9.356±2.77 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087I CIL_00087I_0002 VISTA 12:91377577-91981083
CIL_0000TE CIL_0000TE_0002 CGP 12:91638542-91849157

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0007219 IEA Notch signaling pathway
GO:0016021 IEA integral component of membrane
GO:0034976 IMP response to endoplasmic reticulum stress

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004581 sel1l sel-1 suppressor of lin-12-like (C. elegans) protein_coding Danio_rerio
ENSG00000071537 SEL1L sel-1 suppressor of lin-12-like (C. elegans) protein_coding Homo_sapiens

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