C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1110008L16 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021023 1110008L16Rik 10090 + 12:55299577-55382533 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021411 1110008L16Rik-001 55302637-55382496 protein_coding
  ENSMUST00000183475 1110008L16Rik-004 55303261-55382533 protein_coding
  ENSMUST00000183654 1110008L16Rik-005 55303286-55382513 protein_coding
  ENSMUST00000184249 1110008L16Rik-002 55302750-55307589 retained_intron
  ENSMUST00000184766 1110008L16Rik-003 55303243-55382513 protein_coding
  ENSMUST00000184980 1110008L16Rik-006 55299577-55382420 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021411ENSMUST00000183654ENSMUST00000184766ENSMUST00000184980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021411 1.722±0.11 0.965±0.23 1.933±0.34 1.751±0.72 1.363±0.58 0.690±0.10 1.209±0.22 2.342±0.43 2.064±0.62 0.892±0.26 1.763±0.34 1.684±0.53 1.678±0.20 2.306±0.30
ENSMUST00000183654 3.092±0.60 2.914±0.91 N/A N/A 2.601±0.64 3.142±0.81 N/A 4.463±1.05 1.690±0.19 N/A N/A 2.761±0.66 N/A N/A
ENSMUST00000184766 N/A N/A 2.273±0.64 N/A N/A 0.810±0.00 N/A N/A 0.941±0.01 N/A 1.445±0.13 3.548±0.18 1.804±0.34 N/A
ENSMUST00000184980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.676±2.03 6.856±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045K CIL_00045K_0002 CGP 12:55199533-55303000
CIL_00028P CIL_00028P_0002 CGP 12:55280814-55382533
CIL_00045I CIL_00045I_0002 CGP 12:55299577-55418454

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008033 IEA tRNA processing
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075057 si:dkeyp-33b5.4 si:dkeyp-33b5.4 protein_coding Danio_rerio
ENSG00000100890 KIAA0391 KIAA0391 protein_coding Homo_sapiens
ENSG00000258790 KIAA0391 KIAA0391 protein_coding Homo_sapiens

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