C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin-related transmembrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021072 Tmx1 10090 + 12:70453095-70468040 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021471 Tmx1-001 70453095-70468040 protein_coding
  ENSMUST00000160865 Tmx1-003 70459841-70460576 retained_intron
  ENSMUST00000162277 Tmx1-002 70456038-70466253 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021471ENSMUST00000162277
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021471 5.556±1.37 8.527±0.60 12.974±1.13 14.165±6.56 5.592±1.37 7.427±0.57 11.472±0.87 8.513±1.55 17.684±11.03 8.200±0.76 4.178±0.60 11.975±5.23 20.719±8.63 8.783±2.66
ENSMUST00000162277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069N CIL_00069N_0003 CGP 12:70244539-70468040
CIL_00069M CIL_00069M_0003 CGP 12:70453095-70902232

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005730 IEA nucleolus
GO:0005783 IBA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006457 IBA protein folding
GO:0015036 IEA disulfide oxidoreductase activity
GO:0016021 IEA integral component of membrane
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019487 tmx1 thioredoxin-related transmembrane protein 1 protein_coding Danio_rerio
ENSG00000139921 TMX1 thioredoxin-related transmembrane protein 1 protein_coding Homo_sapiens

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