C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thyroid hormone receptor interactor 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021188 Trip11 10090 - 12:101834043-101913267 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021605 Trip11-001 101834043-101913267 protein_coding
  ENSMUST00000085086 Trip11-002 101912276-101913155 processed_transcript
  ENSMUST00000176728 Trip11-006 101889746-101913140 protein_coding
  ENSMUST00000177183 Trip11-007 101837546-101894316 protein_coding
  ENSMUST00000177480 Trip11-004 101873393-101883607 nonsense_mediated_decay
  ENSMUST00000177536 Trip11-003 101886220-101913123 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021605ENSMUST00000085086ENSMUST00000176728ENSMUST00000177183ENSMUST00000177536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021605 1.050±0.65 1.329±0.41 3.678±1.57 1.684±0.63 1.151±0.13 0.817±0.26 0.928±0.38 1.062±0.39 1.275±0.51 2.362±0.55 0.878±0.34 1.824±0.63 2.953±0.84 0.953±0.32
ENSMUST00000085086 N/A 2.059±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.640±0.00 N/A N/A
ENSMUST00000176728 N/A 3.567±1.10 N/A N/A N/A 2.808±0.47 N/A 3.380±0.00 N/A N/A N/A 2.979±0.84 N/A N/A
ENSMUST00000177183 1.462±0.00 N/A N/A 6.649±0.00 N/A N/A N/A 1.515±0.00 N/A N/A 0.648±0.22 5.062±4.35 7.853±2.13 6.486±5.66
ENSMUST00000177536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.604±4.06 6.349±1.39 9.151±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LX CIL_0002LX_0003 CGP 12:101746565-101913267

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0002079 IEA inner acrosomal membrane
GO:0002080 IDA acrosomal membrane
GO:0002081 IEA outer acrosomal membrane
GO:0003281 IMP ventricular septum development
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0005801 IDA cis-Golgi network

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078381 trip11 thyroid hormone receptor interactor 11 protein_coding Danio_rerio
ENSG00000100815 TRIP11 thyroid hormone receptor interactor 11 protein_coding Homo_sapiens

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