C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 4, regulatory subunit 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021209 Ppp4r4 10090 + 12:103532283-103613831 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021631 Ppp4r4-001 103532283-103613831 protein_coding
  ENSMUST00000187155 Ppp4r4-003 103558431-103613066 protein_coding
  ENSMUST00000189871 Ppp4r4-002 103532570-103612904 nonsense_mediated_decay
  ENSMUST00000190151 Ppp4r4-004 103598220-103602966 protein_coding
  ENSMUST00000190664 Ppp4r4-005 103581398-103591599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021631ENSMUST00000187155ENSMUST00000189871ENSMUST00000190151
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021631 0.556±0.23 1.410±0.62 0.953±0.10 1.312±0.23 0.464±0.20 0.112±0.04 0.071±0.00 0.400±0.02 1.013±0.51 1.189±0.49 0.052±0.02 0.589±0.32 0.451±0.26 7.334±1.87
ENSMUST00000187155 N/A N/A N/A 1.904±0.00 N/A N/A 0.049±0.01 0.260±0.00 0.486±0.00 N/A 0.059±0.03 0.373±0.14 0.193±0.10 8.035±0.00
ENSMUST00000189871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.00 N/A N/A
ENSMUST00000190151 N/A N/A N/A 60.262±0.00 N/A N/A 0.155±0.00 N/A N/A N/A 0.185±0.00 14.387±0.00 2.141±0.37 232.664±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000597 CIL_000597_0003 CGP 12:103532283-103631444

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0008287 ISS protein serine/threonine phosphatase complex
GO:0019888 IEA protein phosphatase regulator activity
GO:0032515 IEA negative regulation of phosphoprotein phosphatase activity
GO:0080163 IEA regulation of protein serine/threonine phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010407 ppp4r4 protein phosphatase 4, regulatory subunit 4 protein_coding Danio_rerio
ENSG00000119698 PPP4R4 protein phosphatase 4, regulatory subunit 4 protein_coding Homo_sapiens

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