C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: degenerative spermatocyte homolog 2 (Drosophila), lipid desaturase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021263 Degs2 10090 - 12:108686792-108702306 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021691 Degs2-201 108690222-108702306 protein_coding
  ENSMUST00000167978 Degs2-202 108686792-108702306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021691ENSMUST00000167978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021691 N/A N/A 26.573±5.15 N/A N/A 149.924±11.57 N/A 9.208±1.17 N/A N/A N/A N/A 6.696±5.09 N/A
ENSMUST00000167978 5.666±0.00 1.104±0.04 4.635±0.66 19.097±7.54 5.605±1.19 10.149±0.64 1.809±0.17 2.047±0.35 0.816±0.36 3.690±0.37 0.445±0.09 6.600±1.62 1.635±0.83 1.981±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HN CIL_0003HN_0002 CGP 12:108370957-108688513
CIL_0003HO CIL_0003HO_0002 CGP 12:108554720-108702306
CIL_00032R CIL_00032R_0002 CGP 12:108686792-108816632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000170 IDA sphingosine hydroxylase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006667 IGI sphinganine metabolic process
GO:0016021 IEA integral component of membrane
GO:0030148 IGI sphingolipid biosynthetic process
GO:0042284 IGI sphingolipid delta-4 desaturase activity
GO:0046513 IDA ceramide biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042544 degs2 degenerative spermatocyte homolog 2, lipid desaturase (Drosophila) protein_coding Danio_rerio
ENSG00000168350 DEGS2 delta(4)-desaturase, sphingolipid 2 protein_coding Homo_sapiens

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