C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor necrosis factor, alpha-induced protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021281 Tnfaip2 10090 + 12:111442469-111455018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102745 Tnfaip2-001 111442469-111455018 protein_coding
  ENSMUST00000109792 Tnfaip2-002 111442658-111454678 protein_coding
  ENSMUST00000127028 Tnfaip2-007 111450519-111453626 retained_intron
  ENSMUST00000127207 Tnfaip2-006 111449518-111451469 retained_intron
  ENSMUST00000129467 Tnfaip2-004 111444324-111445511 protein_coding
  ENSMUST00000133865 Tnfaip2-005 111448135-111449311 retained_intron
  ENSMUST00000156003 Tnfaip2-003 111442662-111454678 retained_intron
  ENSMUST00000172783 Tnfaip2-011 111442662-111448587 nonsense_mediated_decay
  ENSMUST00000173581 Tnfaip2-008 111449873-111453759 nonsense_mediated_decay
  ENSMUST00000174298 Tnfaip2-009 111444998-111453825 nonsense_mediated_decay
  ENSMUST00000174692 Tnfaip2-010 111446084-111453825 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102745ENSMUST00000109792ENSMUST00000127028ENSMUST00000129467ENSMUST00000133865ENSMUST00000156003ENSMUST00000174692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102745 7.656±1.65 9.003±1.55 40.254±19.10 0.386±0.03 12.987±4.61 5.509±1.15 14.329±1.27 13.727±0.87 21.781±14.57 14.390±1.57 10.851±2.10 10.928±4.88 14.655±8.82 23.119±11.48
ENSMUST00000109792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.339±0.00 9.013±0.00 N/A
ENSMUST00000127028 N/A N/A N/A 1.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.017±0.00
ENSMUST00000133865 N/A N/A N/A 0.637±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 58.412±25.26 13.889±0.00
ENSMUST00000156003 N/A 1.709±0.59 7.699±1.80 N/A 1.632±0.00 0.884±0.18 N/A N/A 3.933±2.13 2.055±0.13 N/A 1.747±0.17 N/A N/A
ENSMUST00000174692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_0000OP CIL_0000OP_0002 CGP 12:111417430-111455018

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0001525 IEA angiogenesis
GO:0006887 IEA exocytosis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043416 tnfaip2a tumor necrosis factor, alpha-induced protein 2a protein_coding Danio_rerio
ENSDARG00000058160 tnfaip2b tumor necrosis factor, alpha-induced protein 2b protein_coding Danio_rerio
ENSDARG00000094072 tnfaip2b tumor necrosis factor, alpha-induced protein 2b protein_coding Danio_rerio
ENSG00000185215 TNFAIP2 tumor necrosis factor, alpha-induced protein 2 protein_coding Homo_sapiens

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