C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: complement component 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022149 C9 10090 + 15:6445327-6498751 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022749 C9-001 6445327-6498751 protein_coding
  ENSMUST00000127196 C9-003 6489480-6491422 retained_intron
  ENSMUST00000128097 C9-002 6445372-6467409 nonsense_mediated_decay
  ENSMUST00000147905 C9-004 6489918-6498744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022749ENSMUST00000127196ENSMUST00000128097ENSMUST00000147905
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022749 0.069±0.00 0.016±0.01 0.011±0.00 0.346±0.08 0.060±0.00 0.036±0.00 0.023±0.00 29.434±28.45 0.031±0.00 0.016±0.00 0.141±0.12 3.136±4.05 0.012±0.00
ENSMUST00000127196 N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128097 N/A N/A 0.040±0.00 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A 0.307±0.21 N/A
ENSMUST00000147905 0.263±0.00 0.011±0.00 N/A 0.279±0.00 N/A N/A N/A N/A N/A 0.065±0.03 0.078±0.01 0.187±0.13 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005E5 CIL_0005E5_0002 CGP 15:6299788-6498751

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005579 IEA membrane attack complex
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006957 IEA complement activation, alternative pathway
GO:0006958 IEA complement activation, classical pathway
GO:0019835 IEA cytolysis
GO:0070062 IEA extracellular vesicular exosome
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016319 c9 complement component 9 protein_coding Danio_rerio
ENSG00000113600 C9 complement component 9 protein_coding Homo_sapiens

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