C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GPI-anchored HDL-binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022579 Gpihbp1 10090 + 15:75596628-75599481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023243 Gpihbp1-002 75596630-75598213 protein_coding
  ENSMUST00000186934 Gpihbp1-005 75596668-75598188 retained_intron
  ENSMUST00000189874 Gpihbp1-001 75596654-75599481 protein_coding
  ENSMUST00000189944 Gpihbp1-003 75596628-75598213 protein_coding
  ENSMUST00000190119 Gpihbp1-004 75596668-75597944 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023243ENSMUST00000186934ENSMUST00000189874ENSMUST00000189944ENSMUST00000190119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023243 200.075±143.39 71.148±14.55 8.430±0.86 0.596±0.21 102.678±19.17 4.793±0.76 59.792±7.58 18.876±0.90 14.722±9.02 198.257±8.64 16.596±3.13 17.496±3.59 2.560±1.08 0.481±0.11
ENSMUST00000186934 59.972±0.00 9.922±0.00 1.701±0.00 N/A 11.986±0.00 0.493±0.00 13.981±0.82 N/A 0.530±0.03 41.504±0.74 3.457±0.31 N/A 1.629±0.00 0.089±0.04
ENSMUST00000189874 N/A N/A N/A N/A N/A N/A 6.495±0.00 N/A N/A N/A 2.757±0.80 0.988±0.00 N/A 0.065±0.02
ENSMUST00000189944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.424±0.00 11.021±12.34 0.809±0.72
ENSMUST00000190119 N/A 11.619±2.90 1.644±0.00 0.086±0.00 N/A 1.120±0.10 11.439±0.94 N/A N/A N/A 3.218±0.03 N/A N/A 0.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0002NW CIL_0002NW_0002 CGP 15:75551268-75599481
CIL_0002NY CIL_0002NY_0002 CGP 15:75596628-75625300

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006869 IDA lipid transport
GO:0006886 IDA intracellular protein transport
GO:0008035 IDA high-density lipoprotein particle binding
GO:0008289 IEA lipid binding
GO:0008320 IDA protein transmembrane transporter activity
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0017038 IDA protein import
GO:0031362 IEA anchored component of external side of plasma membrane
GO:0034364 IEA high-density lipoprotein particle
GO:0034394 IDA protein localization to cell surface
GO:0035473 IPI lipase binding
GO:0035478 IMP chylomicron binding
GO:0042632 IMP cholesterol homeostasis
GO:0045056 IDA transcytosis
GO:0046658 IDA anchored component of plasma membrane
GO:0050821 IDA protein stabilization
GO:0051006 IMP positive regulation of lipoprotein lipase activity
GO:0070328 IMP triglyceride homeostasis
GO:0071503 IEA response to heparin
GO:0071806 IDA protein transmembrane transport
GO:0071813 IMP lipoprotein particle binding
GO:0090319 IC positive regulation of chylomicron remodeling
GO:0090321 IMP positive regulation of chylomicron remnant clearance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000277494 GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein_coding Homo_sapiens

Loading