C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member A5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022664 Slc35a5 10090 - 16:45139573-45158706 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023344 Slc35a5-001 45139573-45158706 protein_coding
  ENSMUST00000114600 Slc35a5-002 45144190-45158183 protein_coding
  ENSMUST00000152364 Slc35a5-003 45144027-45151921 retained_intron
  ENSMUST00000180636 Slc35a5-006 45144170-45158644 protein_coding
  ENSMUST00000181177 Slc35a5-007 45141946-45158566 protein_coding
  ENSMUST00000181377 Slc35a5-004 45154674-45158600 retained_intron
  ENSMUST00000181437 Slc35a5-005 45152562-45158655 retained_intron
  ENSMUST00000181750 Slc35a5-008 45152605-45158453 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023344ENSMUST00000114600ENSMUST00000152364ENSMUST00000180636ENSMUST00000181177ENSMUST00000181377ENSMUST00000181437
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023344 4.910±0.45 6.239±1.18 5.920±0.20 5.356±2.51 5.198±1.29 3.149±0.78 1.744±0.46 6.581±0.39 2.963±1.21 7.147±0.19 0.647±0.13 5.563±1.99 1.512±0.42 7.911±3.84
ENSMUST00000114600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.625±0.00
ENSMUST00000152364 5.581±0.81 4.479±0.48 N/A N/A 7.740±1.30 4.082±0.92 2.183±0.49 8.447±1.93 4.329±0.27 7.066±0.56 N/A 6.554±1.26 3.706±0.00 28.073±2.09
ENSMUST00000180636 N/A N/A N/A N/A N/A N/A 1.316±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.594±0.00 3.133±0.00
ENSMUST00000181377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.477±0.00
ENSMUST00000181437 N/A N/A N/A N/A N/A N/A N/A N/A 5.313±0.67 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZV CIL_0004ZV_0002 CGP 16:45093402-45158706

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003674 ND molecular_function
GO:0005338 IEA nucleotide-sugar transmembrane transporter activity
GO:0005351 IEA sugar:proton symporter activity
GO:0008150 ND biological_process
GO:0008643 IEA carbohydrate transport
GO:0015780 IEA nucleotide-sugar transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane
GO:1901679 IEA nucleotide transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000001 slc35a5 solute carrier family 35, member A5 protein_coding Danio_rerio
ENSG00000138459 SLC35A5 solute carrier family 35, member A5 protein_coding Homo_sapiens

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