C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: purinergic receptor P2X, ligand-gated ion channel, 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022758 P2rx6 10090 + 16:17561885-17577800 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023441 P2rx6-001 17561885-17572011 protein_coding
  ENSMUST00000168383 P2rx6-003 17561933-17577800 nonsense_mediated_decay
  ENSMUST00000171002 P2rx6-002 17561885-17571100 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLungMuscleOvaryPlacentaENSMUST00000023441ENSMUST00000168383
Transcript ID Adipose Bladder Brain Breast Heart Kidney Lung Muscle Ovary Placenta
ENSMUST00000023441 7.945±3.79 3.134±0.17 1.615±0.00 3.318±1.48 0.720±0.00 0.598±0.12 4.636±0.69 5.761±2.08 5.521±1.22 0.197±0.05
ENSMUST00000168383 N/A N/A N/A N/A N/A N/A 2.261±0.30 N/A 3.345±0.91 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0002TB CIL_0002TB_0002 CGP 16:17561885-17577800

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001614 IBA purinergic nucleotide receptor activity
GO:0004931 IBA extracellular ATP-gated cation channel activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005639 IBA integral component of nuclear inner membrane
GO:0005737 IEA cytoplasm
GO:0005887 ISS integral component of plasma membrane
GO:0006812 IBA cation transport
GO:0014069 IEA postsynaptic density
GO:0030054 IEA cell junction
GO:0034220 IBA ion transmembrane transport
GO:0035590 IEA purinergic nucleotide receptor signaling pathway
GO:0042802 IEA identical protein binding
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0051260 IEA protein homooligomerization
GO:0051291 IEA protein heterooligomerization
GO:0098655 IBA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099957 P2RX6 purinergic receptor P2X, ligand-gated ion channel, 6 protein_coding Homo_sapiens

Loading