C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate receptor, ionotropic, kainate 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022935 Grik1 10090 - 16:87896196-88056176 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023652 Grik1-201 87896196-88056176 protein_coding
  ENSMUST00000072256 Grik1-202 87896196-88056176 protein_coding
  ENSMUST00000114137 Grik1-203 87912421-88056176 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000023652ENSMUST00000072256ENSMUST00000114137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000023652 0.222±0.02 0.005±0.00 0.440±0.00 1.178±0.00 0.017±0.00 0.121±0.07 0.030±0.02 0.007±0.01 0.048±0.04 0.093±0.06 0.013±0.00 0.198±0.07
ENSMUST00000072256 N/A 0.046±0.02 N/A 1.878±0.70 N/A 0.041±0.03 N/A N/A 0.005±0.00 0.044±0.02 N/A N/A
ENSMUST00000114137 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A 0.127±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000317 CIL_000317_0002 CGP 16:87698945-88056176
CIL_00031A CIL_00031A_0002 CGP 16:87896196-88506978

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005515 IPI protein binding
GO:0008328 IC ionotropic glutamate receptor complex
GO:0014054 IMP positive regulation of gamma-aminobutyric acid secretion
GO:0014069 IDA postsynaptic density
GO:0015277 IGI kainate selective glutamate receptor activity
GO:0016020 IDA membrane
GO:0030054 IEA cell junction
GO:0030425 IDA dendrite
GO:0030534 IMP adult behavior
GO:0032230 IMP positive regulation of synaptic transmission, GABAergic
GO:0032983 IPI kainate selective glutamate receptor complex
GO:0034220 IEA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway
GO:0035249 IMP synaptic transmission, glutamatergic
GO:0042391 IMP regulation of membrane potential
GO:0042734 IDA presynaptic membrane
GO:0045202 IDA synapse
GO:0045211 IBA postsynaptic membrane
GO:0048266 IMP behavioral response to pain
GO:0051899 IMP membrane depolarization
GO:0051967 IGI negative regulation of synaptic transmission, glutamatergic
GO:0060079 IMP regulation of excitatory postsynaptic membrane potential
GO:0060080 IGI regulation of inhibitory postsynaptic membrane potential
GO:0097481 IDA neuronal postsynaptic density

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040627 GRIK1 (1 of 2) glutamate receptor, ionotropic, kainate 1 protein_coding Danio_rerio
ENSDARG00000069139 grik1a glutamate receptor, ionotropic, kainate 1a protein_coding Danio_rerio
ENSG00000171189 GRIK1 glutamate receptor, ionotropic, kainate 1 protein_coding Homo_sapiens

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